Browse of TCMCG006C21458 protein

CDS

Accession Number	TCMCG006C21458
gbkey	CDS
Protein Id	XP_022555182.1
Location	complement(join(36081733..36081891,36081989..36082099,36082191..36082313,36082433..36082618,36082719..36082889,36082965..36083450,36083588..36084590,36084676..36084954,36085038..36085174,36085255..36085507,36085598..36085710,36085778..36085882,36085963..36086025,36086111..36086245,36086330..36086413,36086546..36086632,36086831..36086890,36086988..36087104,36087191..36087388,36087498..36087607,36087692..36087698,36087808..36087873,36087957..36088184,36088282..36088361,36088486..36088594,36088677..36088775,36088875..36089002,36089077..36089155,36089276..36089364,36089818..36090022,36090262..36090306))
Gene	LOC106388979
GeneID	106388979
Organism	Brassica napus

Protein

Length	1704aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022699461.1
Definition	clathrin heavy chain 2-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	U
Description	Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko04131        [VIEW IN KEGG] ko04147        [VIEW IN KEGG]
KEGG_ko	ko:K04646        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04142        [VIEW IN KEGG] ko04144        [VIEW IN KEGG] ko04721        [VIEW IN KEGG] ko04961        [VIEW IN KEGG] ko05016        [VIEW IN KEGG] ko05100        [VIEW IN KEGG] map04142        [VIEW IN KEGG] map04144        [VIEW IN KEGG] map04721        [VIEW IN KEGG] map04961        [VIEW IN KEGG] map05016        [VIEW IN KEGG] map05100        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005794        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006897        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016192        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0042802        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0098657        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGCAGCAAACGCCCCCATCACGATGAAGGAGGTCCTCACGCTTCCGAGCGTTGGGATCAATCAGCAGTTCATCACGTTTACGAATGTTACTATGGAGTCTGACAAGTATATATGCGTTCGAGAGACGGTTCCTCAAAACAGCGTTGTAATTATTGATATGAGTATGCCGATGCAGCCTCTGAGGAGGCCTATTACTGCTGATTCTGCTCTTATGAACCCAGACTCCAGGATCCTTGCCTTAAAAGCTCAAGTTCCAGGAACTACTCAGGATCATCTACAGATATTTAACATCGAAGCAAAAGCAAAGCTTAAATCACATCAGATGCCTGAGCAGGTTGCGTTTTGGAAGTGGATTACACCCAAGATGTTGGGGCTGGTCACACAAAATTCCTTGTATCATTGGTCTATTGAAGGTGATTCTGAACCTGTTAAGATGTTTGATAGAACGGCCAATTTAGCAAACAATCAAATTATTAACTACAAGTGCTCTCCTAATGAGAAGTGGTTGGTTCTAATTGGAATTGCTCCTGGCCCTCCTGAGAGAGCACAATTGGTAAAAGGAAATATGCAGCTTTTTTCTGTGGATCAACAGCGGAGCCAGGCCCTTGAAGCACACGCTGCCTCATTTGCTCAGTTTAAGGTTCCTGGAAACGAAAATCCTTCTATCCTTATATCCTTTGCAAGCAAGAGCTTTAATGCTGGGCAGATAACATCAAAGTTGCACGTCATTGAGCTTGGTGCCCAACCCGGAAAACCATCATTTACAAAAAAGCAGGCGGATCTCTTTTTCCCCCCAGATTTTGCTGATGACTTCCCTGTGGCCATGCAGGTCTCTCACAAATTTAGCTTGATATATGTCATCACCAAGCTTGGATTGTTGTTTGTATACGATCTGGAAACTGCTTCTGCTATCTACAGAAATCGAATAAGTCCAGACCCAATTTTCTTGACTTCTGAAGCCTCTTCAGTTGGGGGTTTCTATGCCATTAATAGGCGAGGACAAGTTCTTTTGGCCACAGTAAACGAGGCTACTATAATACCTTTTATTAGTGGTCAATTGAACAATTTGGAGCTTGCTGTCAATCTTGCTAAAAGAGGAAACCTCCCTGGTGCAGAAGAGCTGGTTGTGGAGCGGTTCAAAGAGCTTTTTGCTCAGACGAAGTACAAGGAGGCTGCTGAGCTTGCTGCTGAATCTCCTCAGGGAATTCTAAGGACACCTGATACAGTGGCCAAATTCCAGAGTGTTCCTGTACAAGCTGGGCAAACTCCTCCGTTGTTACAATATTTTGGGACTCTCTTAACTAAAGGAAAGCTCAATTCATATGAGTCATTGGAACTATCTCGGCTTGTTGTGAATCAAAACAAGAAGAACCTCCTGGAAAACTGGTTAGCAGAGGATAAATTAGAATGCAGTGAAGAACTGGGAGACCTTGTCAAGACTGTGGATAATGACCTTGCTCTGAAAATATATATCAAAGCCCGGGCAACTCCAAAAGTTGTAGCGGCTTTTGCAGAAAGAAAGGAGTTTGACAAAATCCTGATTTACTCAAAGCAGGTTGGGTACACACCTGATTACATGTTTCTTCTGCAAACAATACTCCGTACAGATCCCCAGGGAGCAGTCAATTTTGCATTAATGATGTCTCAAATGGAAGGAGGTTGTCCAGTTGACTTCAACACCATCACTGACCTTTTTCTTCAGAGAAATCTGATCCGAGAAGCTACTGCATTCCTTTTGGATGTGCTTAAGCCAAATTTACCTGAGCATGCGTTTCTTCAAACTAAGGTTCTGGAGATCAATTTGGTAACCTTTCCTAATGTGGCTGATGCGATTTTAGCAAATGGGATGTTCAGCCACTATGACCGGCCTCGTGTTGCTCAACTTTGTGAGAAGGCTGGACTTTTTATCCAATCCTTAAAGCATTACTCAGAGTTACCTGATATAAAACGTGTAATTGTGAACACACATGCTATTGAGCCACAGGCTCTTGTTGAGTTTTTTGGTACTCTTTCTAGCGATTGGGCTATGGAGTGCATGAAGGATCTTTTGCTGGTCAACCTTAGAGGCAACCTGCAGATAATTGTTCAGGCTTGCAAGGAGTACTGTGAACAACTTGGTGTTGATGCATGTATTAAGCTCTTTGAGCAGTTTAAATCATACGAAGGCCTCTACTTTTTCCTAGGCTCATATTTGAGTATGAGTGAGGATCCTGAGATTCACTTCAAGTACATTGAAGCAGCTGCCAAGACTGGTCAAATAAAGGAGGTTGAGCGTGTGACTAGAGAGTCTAACTTCTATGATGCTGAAAAGACGAAGAACTTTTTGATGGAAGCTAAGCTTCCTGATGCCCGACCTTTGATAAATGTCTGCGACCGTTTCGGCTTTGTACCTGATCTAACTCATTACCTCTACACAAACAACATGCTTCGTTATATTGAAGGTTACGTTCAGAAGGTGAACCCTGGGAATGCTCCCTTAGTTGTGGGTCAGTTGCTTGATGATGAATGCCCTGAAGATTTTATAAAAGGCCTCATTCTCTCTGTTCGCTCATTGCTACCTGTTGAACCCCTTGTCGATGAATGCGAGAAGAGAAATCGACTCCGTCTCCTCACTCAGTTCTTGGAGCATCTAGTTAGCGAGGGAAGCCAAGATGTTCATGTCCATAACGCCTTGGGTAAAATTATCATCGACAGTAACAACAACCCCGAGCATTTCCTGACCACCAACCCGTACTATGACTCTCGGGTTGTTGGCAAGTACTGCGAGAAGCGTGATCCTACCCTGGCTGTTGTGGCATACAGAAGAGGACAATGCGATGAGGAACTCGTCAATGTCACCAACAAAAATTCTTTGTTCAAGTTACAAGCCAGGTATGTAGTGGAGAGGATGGATGGTGATCTTTGGGATAAGGTTCTTATGGAAGAAAATGAATATAGAAGACAACTTATTGACCAAGTTGTGTCTACTGCTTTACCCGAAAGCCAGAGCCCAGAGCAGGTATCCGCTGCTGTGAAAGCATTCATGACCGCTGATTTGCCGCACGAGCTTATTGAGCTTCTTGAAAAAATAGTGCTTCAAAACTCTGCCTTCAGTGGAAACTTCAATCTGCAAAATCTGCTTATATTGACAGCTATTAAAGCAGATCCATCTAGAGTGATGGATTACATTAATAGGCTGGACAATTTTGATGGACCTGCTGTTGGAGAAGTGGCTGTTGAAGCCCAACTGTACGAGGAGGCATTTGCTATTTTCAAGAAATTTAACTTAAATGTTCAGGCTGTCGACGTATTACTGGATAACGTCAAAAGCATTGAGCGTGCTGTTGAGTTTGCTTTCCGGGTTGAAGAAGATTCTGTTTGGAGCCAAGTTGCAAAGGCTCAACTCAGGGAAGGACTAGTCAGTGATGCAATTGAGTCCTTTATCCGTGCTGAGGATGCCACGCATTTCTTGGAGGTCATACGTGCTACTGAAGATGCTAATGTCTATGATGACTTGGTCAGATACCTTCTGATGGTTAGACAGAAGGTGAAGGAGCCCAAGGTTGATAGTGAGCTCATCTATGCATATGCAAAGATTGATAGGTTAGGTGAGATCGAAGAATTCATTCTGATGCCAAACGTTGCTATCCTACCAAATGTTGGTGATCGCCTGTATGACGAAGCTCTGTATGAAGGTGCAAAAATAATCTATGCGTTCATATCGAACTGGGGCAAGTTAGCTGTCACGCTTGTGAAGTTGCAACAGTTCCAAGGTGCTGTTGATGCTGCAAGGAAAGCAAACAGTGCAAAGACATGGAAGGAAGTCTGCTTTGCTTGTGTTGATGCAGAGGAATTCCGGTTGGCACAGATCTGTGGCCTTAACGTTATCATTCAGGTGGATGATCTGGAAGAAGTAAGCGAGTTCTACCAGAACAGAGGGTGCTTCAATGAATTAATCTCACTTATGGAGAGTGGACTTGGGCTGGAGCGTGCTCACATGGGTATCTTCACTGAGTTGGGTGTACTCTATGCTAGATATCGATATGAGAAACTTATGGAACACATTAAGCTATTCTCCACTCGCCTCAATATCCCCAAGCTCATACGGGCCTGTGATGAACAACAGCACTGGCAGGAACTTACTTATCTCTACATTCAATATGATGAGTTTGATAATACTGCGACCACTGTGATGAACCATTCTCCTGAAGCGTGGGAGCACATGCAATTCAAAGACATTGTTGCCAAGGTTGCAAATGTCGAGCTGTACTACAAGGCTGTGCATTTCTACCTACAGGAGCATCCTGATCTGATCAACGATCTTCTCAACGTGCTTGCTTTGCGGTTAGATCACACCCGTGTTGTCGATATTTTGCGGAAGGCTGGCCAGTTGCGTCTTATCAAGCCATACATGGTTGCAGTTCAGAGCAACAATGTCTCTGCTGTCAATGAAGCTCTGAATGAGATATATGTGGAAGAAGAAGACTATGACAGGTTGCGCGAGTCTATTGATTTACATGACAGCTTTGACCAGATAGGCCTCGCGCAGAAGATTGAGAAACACGAGCTTGTTGAAATGAGACGTGTGGCTGCTTATATCTACAAGAAAGCGGGTAGATGGAAGCAATCGATTGCTTTGTCAAAGAAAGACAACATGTACAAAGACTGTATGGAAACTGCTTCACAATCCGGTGAACATGACCTTGCAGAACAACTGTTGGTTTACTTCATTGAACAGGGCAAAAAGGAATGCTTTGCTACATGTCTCTTTGTATGTTATGATTTAATCCGACCAGACGTTGCTCTAGAACTTGCCTGGATCAATAACATGCTCGACTTTGCCTTCCCGTATCTCCTCCAGTTTATCCGAGAGTACTCGGGCAAAGTGGATGAGCTAATCAAAGACAAGCTGGAGGCACAAAAAGAGGTGAAGGCCAAAGAGCAGGAAGATAAGGATGTTATGTCCCAACAGAACATGTACGCTCAACTGTTGCCACTTGCTTTGCCCGCACCACCAATGCCAGGAATGGGAGGTGGTGGTGGGTATGGTCCGCCACCACCAATGGGCGGAGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGCCACCAATGGGTGGCTACTAA

Protein:   MAAANAPITMKEVLTLPSVGINQQFITFTNVTMESDKYICVRETVPQNSVVIIDMSMPMQPLRRPITADSALMNPDSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWITPKMLGLVTQNSLYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGPPERAQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITSKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFSLIYVITKLGLLFVYDLETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLELAVNLAKRGNLPGAEELVVERFKELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTKGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERKEFDKILIYSKQVGYTPDYMFLLQTILRTDPQGAVNFALMMSQMEGGCPVDFNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLFIQSLKHYSELPDIKRVIVNTHAIEPQALVEFFGTLSSDWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFKSYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELVNVTNKNSLFKLQARYVVERMDGDLWDKVLMEENEYRRQLIDQVVSTALPESQSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVDVLLDNVKSIERAVEFAFRVEEDSVWSQVAKAQLREGLVSDAIESFIRAEDATHFLEVIRATEDANVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIDRLGEIEEFILMPNVAILPNVGDRLYDEALYEGAKIIYAFISNWGKLAVTLVKLQQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYIQYDEFDNTATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDLINDLLNVLALRLDHTRVVDILRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGEHDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMLDFAFPYLLQFIREYSGKVDELIKDKLEAQKEVKAKEQEDKDVMSQQNMYAQLLPLALPAPPMPGMGGGGGYGPPPPMGGGMPGMPPMPPYGMPPMGGY